Prof.ssa Barbara Montanini

Professore Associato

Pubblicazioni selezionate

  1. de Llobet Cucalon L, Di Vona C, Morselli M, Vezzoli M, Montanini B, Teichmann M, de la Luna S, Ferrari R. An RNA Polymerase III General Transcription Factor Engages in Cell Type-Specific Chromatin Looping. Int J Mol Sci. 2022 Feb 18;23(4):2260.
  2. Caputo A, Sartini S, Levati E, Minato I, Elisi GM, Di Stasi A, Guillou C, Goekjian PG, Garcia P, Gueyrard D, Bach S, Comte A, Ottonello S, Rivara S, Montanini B. An Optimized Workflow for the Discovery of New Antimicrobial Compounds Targeting Bacterial RNA Polymerase Complex Formation. Antibiotics (Basel). 2022 Oct 21;11(10):1449.
  3. Barili V, Fisicaro P, Montanini B, Acerbi G, Filippi A, Forleo G, Romualdi C, Ferracin M, Guerrieri F, Pedrazzi G, Boni C, Rossi M, Vecchi A, Penna A, Zecca A, Mori C, Orlandini A, Negri E, Pesci M, Massari M, Missale G, Levrero M, Ottonello S, Ferrari C. Targeting p53 and histone methyltransferases restores exhausted CD8+ T cells in HCV infection. Nat Commun. 2020 Jan 30;11(1):604.
  4. Mattarozzi M, Di Zinno J, Montanini B, Manfredi M, Marengo E, Fornasier F, Ferrarini A, Careri M, Visioli G. Biostimulants applied to maize seeds modulate the enzymatic activity and metaproteome of the rhizosphere. Appl Soil Ecol. 2020, 148, 103480.
  5. Sartini S, Levati E, Maccesi M, Guerra M, Spadoni G, Bach S, Benincasa M, Scocchi M, Ottonello S, Rivara S, Montanini B: New Antimicrobials Targeting Bacterial RNA Polymerase Holoenzyme Assembly Identified with an in Vivo BRET-Based Discovery Platform. ACS Chem Biol 2019, 14(8):1727-1736.
  6. Cantarella S, Di Nisio E, Carnevali D, Dieci G*, Montanini B*: Interpreting and integrating big data in non-coding RNA research. Emerging Topics in Life Sciences 2019,3(4)343-355.
  7. Cantarella S, Carnevali D, Morselli M, Conti A, Pellegrini M, Montanini B, Dieci G: Alu RNA Modulates the Expression of Cell Cycle Genes in Human Fibroblasts. Int J Mol Sci 2019, 20(13).
  8. Ferrari A, Maggi S, Montanini B, Levante A, Lazzi C, Yamaguchi Y, Rivetti C, Folli C: Identification and first characterization of DinJ-YafQ toxin-antitoxin systems in Lactobacillus species of biotechnological interest. Sci Rep 2019, 9(1):7645.
  9. Levante A, Folli C, Montanini B, Ferrari A, Neviani E, Lazzi C. Expression of DinJ-YafQ System of Lactobacillus casei Group Strains in Response to Food Processing Stresses. Microorganisms. 2019 Oct 11;7(10):438.
  10. Murat C, Payen T, Noel B, Kuo A, Morin E, Chen J, Kohler A, Krizsan K, Balestrini R, Da Silva C, Montanini B, et al: Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle. Nature Ecol Evol 2018, 2(12):1956-1965.
  11. Fisicaro P, Barili V, Montanini B, Acerbi G, Ferracin M, Guerrieri F, Salerno D, Boni C, Massari M, Cavallo MC et al: Targeting mitochondrial dysfunction can restore antiviral activity of exhausted HBV-specific CD8 T cells in chronic hepatitis B. Nat Med 2017, 23(3):327-336.
  12. Corbel C, Sartini S, Levati E, Colas P, Maillet L, Couturier C, Montanini B*, Bach S*: Screening for Protein-Protein Interaction Inhibitors Using a Bioluminescence Resonance Energy Transfer (BRET)-Based Assay in Yeast. SLAS discovery 2017:2472555216689530.
  13. Matone A, Derlindati E, Marchetti L, Spigoni V, Dei Cas A, Montanini B, Ardigo D, Zavaroni I, Priami C, Bonadonna RC: Identification of an early transcriptomic signature of insulin resistance and related diseases in lymphomonocytes of healthy subjects. PloS one 2017, 12(8):e0182559.
  14. Mattarozzi M, Manfredi M, Montanini B, Gosetti F, Sanangelantoni AM, Marengo E, Careri M, Visioli G: A metaproteomic approach dissecting major bacterial functions in the rhizosphere of plants living in serpentine soil. Analytical and bioanalytical chemistry 2017, 409(9):2327-2339.
  15. Daguerre Y, Levati E, Ruytinx J, Tisserant E, Morin E, Kohler A, Montanini B, Ottonello S, Brun A, Veneault-Fourrey C et al: Regulatory networks underlying mycorrhizal development delineated by genome-wide expression profiling and functional analysis of the transcription factor repertoire of the plant symbiotic fungus Laccaria bicolor. BMC Genomics 2017, 18(1):737.
  16. Gerace R*, Montanini B*, Proietto M, Levati E, De Luca C, Brenna A, Filetici P, Kohler A, Ottonello S, Ballario P: Photoreceptors in the dark: A functional white collar-like complex and other putative light-sensing components encoded by the genome of the subterranean fungus Tuber melanosporum. Fungal biology 2017, 121(3):253-263.
  17. Cavazzini D, Grossi G, Levati E, Vallese F, Montanini B, Bolchi A, Zanotti G, Ottonello S: A family of archaea-like carboxylesterases preferentially expressed in the symbiotic phase of the mychorrizal fungus Tuber melanosporum. Sci Rep 2017, 7(1):7628.
  18. Tebaldi G, Jacca S, Montanini B, Capra E, Rosamilia A, Sala A, Stella A, Castiglioni B, Ottonello S, Donofrio G: Virus-Mediated Metalloproteinase 1 Induction Revealed by Transcriptome Profiling of Bovine Herpesvirus 4-Infected Bovine Endometrial Stromal Cells. Biol Reprod 2016, 95(1):12.
  19. Levati E, Sartini S, Ottonello S, Montanini B: Dry and wet approaches for genome-wide functional annotation of conventional and unconventional transcriptional activators. Comput Struct Biotechnol J 2016, 14:262-270.
  20. Levati E, Sartini S, Bolchi A, Ottonello S, Montanini B: Moonlighting transcriptional activation function of a fungal sulfur metabolism enzyme. Sci Rep 2016, 6:25165.
  21. Morselli M, Pastor WA, Montanini B, Nee K, Ferrari R, Fu K, Bonora G, Rubbi L, Clark AT, Ottonello S et al: targeting of DNA methylation by histone modifications in yeast and mouse. eLife 2015, 4.
  22. Derlindati E, Dei Cas A, Montanini B, Spigoni V, Curella V, Aldigeri R, Ardigo D, Zavaroni I, Bonadonna RC: Transcriptomic analysis of human polarized macrophages: more than one role of alternative activation? PloS one 2015, 10(3):e0119751.
  23. Montanini B, Chen PY, Morselli M, Jaroszewicz A, Lopez D, Martin F, Ottonello S, Pellegrini M: Non-exhaustive DNA methylation-mediated transposon silencing in the black truffle genome, a complex fungal genome with massive repeat element content. Genome biology 2014, 15(7):411.
  24. Chen PY, Montanini B, Liao WW, Morselli M, Jaroszewicz A, Lopez D, Ottonello S, Pellegrini M: A comprehensive resource of genomic, epigenomic and transcriptomic sequencing data for the black truffle Tuber melanosporum. GigaScience 2014, 3:25.
  25. Brenna A, Montanini B, Muggiano E, Proietto M, Filetici P, Ottonello S, Ballario P: Integrative gene transfer in the truffle Tuber borchii by Agrobacterium tumefaciens-mediated transformation. AMB Express 2014, 4:43.
  26. Turroni F, Foroni E, Serafini F, Viappiani A, Montanini B, Bottacini F, Ferrarini A, Bacchini PL, Rota C, Delledonne M et al: Ability of Bifidobacterium breve To Grow on Different Types of Milk: Exploring the Metabolism of Milk through Genome Analysis. Appl Environ Microbiol 2011, 77(20):7408-7417.
  27. Turroni F, Foroni E, Montanini B, Viappiani A, Strati F, Duranti S, Ferrarini A, Delledonne M, van Sinderen D, Ventura M: Global genome transcription profiling of Bifidobacterium bifidum PRL2010 under in vitro conditions and identification of reference genes for quantitative real-time PCR. Appl Environ Microbiol 2011, 77(24):8578-8587.
  28. Plett JM, Montanini B, Kohler A, Ottonello S, Martin F: Tapping genomics to unravel ectomycorrhizal symbiosis. Methods in molecular biology 2011, 722:249-281.
  29. Montanini B, Levati E, Bolchi A, Kohler A, Morin E, Tisserant E, Martin F, Ottonello S: Genome-wide search and functional identification of transcription factors in the mycorrhizal fungus Tuber melanosporum. New Phytol 2011, 189(3):736-750.
  30. Koharudin LM, Viscomi AR, Montanini B, Kershaw MJ, Talbot NJ, Ottonello S, Gronenborn AM: Structure-function analysis of a CVNH-LysM lectin expressed during plant infection by the rice blast fungus Magnaporthe oryzae. Structure 2011, 19(5):662-674.
  31. Martin, A. Kohler, C. Murat, R. Balestrini, P. M. Coutinho, O. Jaillon, B. Montanini, et al,. "Perigord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis." 2010 Nature 464(7291): 1033-8.
  32. Migeon, D. Blaudez, O. Wilkins, Montanini, M. M. Campbell, P. Richaud, S. Thomine, M. Chalot (2010). "Genome-wide analysis of plant metal transporters, with an emphasis on poplar." Cell Mol Life Sci 67(22): 3763-84.
  33. Dieci, M. Preti, B. Montanini (2009). "Eukaryotic snoRNAs: a paradigm for gene expression flexibility." Genomics 94(2): 83-8.
  34. Martin, A. Aerts, D. Ahrén, A. Brun, E. G. J. Danchin, F. Duchaussoy, J. Gibon, A. Kohler, E. Lindquist, V. Pereda, A. Salamov, H. Shapiro, J. Wuyts, D. Blaudez, M. Buée, P. Brokstein, B. Canbäck, D. Cohen, P. E. Courty, P. M. Coutinho, C. Delaruelle, J. C. Detter, A. Deveau, S. DiFazio, S. Duplessis, L. Fraissinet-Tachet, E. Lucic, P. Frey-Klett, C. Fourrey, I. Feussner, G. Gay, J. Grimwood, P. J. Hoegger, P. Jain, S. Kilaru, J. Labbé, Y. C. Lin, V. Legue, F. Le Tacon, R. Marmeisse, D. Melayah, B. Montanini, et al (2008). "The genome sequence of Laccaria bicolor provides insights into mycorrhizal symbiosis." Nature 452: 88-93.
  35. Peiter, B. Montanini, A. Gobert, P. Pedas, S. Husted, F. J. Maathuis, D. Blaudez, M. Chalot, D. Sanders (2007). "A secretory pathway-localized cation diffusion facilitator confers plant manganese tolerance." Proc Natl Acad Sci U S A 104(20): 8532-7.
  36. Montanini, D. Blaudez, S. Jeandroz, D. Sanders, M. Chalot (2007). "Phylogenetic and functional analysis of the Cation Diffusion Facilitator (CDF) family: improved signature and prediction of substrate specificity." BMC Genomics 8(1): 107.
  37. Couturier, B. Montanini, F. Martin, A. Brun, D. Blaudez, M. Chalot (2007). "The expanded family of ammonium transporters in the perennial poplar plant." New Phytol 174(1): 137-150.
  38. A. Tuskan, S. Difazio, S. Jansson, J. Bohlmann, I. Grigoriev, U. Hellsten, N. Putnam, S. Ralph, S. Rombauts, A. Salamov, J. Schein, L. Sterck, A. Aerts, R. R. Bhalerao, R. P. Bhalerao, D. Blaudez, W. Boerjan, A. Brun, A. Brunner, V. Busov, M. Campbell, J. Carlson, M. Chalot, J. Chapman, G. L. Chen, D. Cooper, P. M. Coutinho, J. Couturier, S. Covert, Q. Cronk, R. Cunningham, J. Davis, S. Degroeve, A. Dejardin, C. Depamphilis, J. Detter, B. Dirks, I. Dubchak, S. Duplessis, J. Ehlting, B. Ellis, K. Gendler, D. Goodstein, M. Gribskov, J. Grimwood, A. Groover, L. Gunter, B. Hamberger, B. Heinze, Y. Helariutta, B. Henrissat, D. Holligan, R. Holt, W. Huang, N. Islam-Faridi, S. Jones, M. Jones-Rhoades, R. Jorgensen, C. Joshi, J. Kangasjarvi, J. Karlsson, C. Kelleher, R. Kirkpatrick, M. Kirst, A. Kohler, U. Kalluri, F. Larimer, J. Leebens-Mack, J. C. Leple, P. Locascio, Y. Lou, S. Lucas, F. Martin, B. Montanini, et al (2006). "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Science 313(5793): 1596-604.
  39. Montanini, S. Gabella, S. Abba, M. Peter, A. Kohler, P. Bonfante, M. Chalot, F. Martin, S. Ottonello (2006). "Gene expression profiling of the nitrogen starvation stress response in the mycorrhizal ascomycete Tuber borchii." Fungal Genet Biol 43(9): 630-41.
  40. Montanini, A. R. Viscomi, A. Bolchi, Y. Martin, J. M. Siverio, R. Balestrini, P. Bonfante, S. Ottonello (2006). "Functional properties and differential mode of regulation of the nitrate transporter from a plant symbiotic ascomycete." Biochem J 394(Pt 1): 125-34.
  41. Donini, R. Percudani, A. Credali, B. Montanini, A. Sartori, A. Peracchi (2006). "A threonine synthase homolog from a mammalian genome." Biochem Biophys Res Commun 350(4): 922-8.
  42. Gabella, S. Abba, S. Duplessis, B. Montanini, F. Martin, P. Bonfante (2005). "Transcript profiling reveals novel marker genes involved in fruiting body formation in Tuber borchii." Eukaryot Cell 4(9): 1599-602.
  43. Percudani, B. Montanini, S. Ottonello (2005). "The anti-HIV cyanovirin-N domain is evolutionarily conserved and occurs as a protein module in eukaryotes." Proteins 60(4): 670-8.
  44. Montanini, M. Betti, A. J. Marquez, R. Balestrini, P. Bonfante, S. Ottonello (2003). "Distinctive properties and expression profiles of glutamine synthetase from a plant symbiotic fungus." Biochem J 373(Pt 2): 357-68.
  45. Montanini, N. Moretto, E. Soragni, R. Percudani, S. Ottonello (2002). "A high-affinity ammonium transporter from the mycorrhizal ascomycete Tuber borchii." Fungal Genet Biol 36(1): 22-34.

 

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